ncRNA ID | novel_vvi_miR431 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:9751242-9751429 [-] |
Reference genome | 12X |
Source | SRR1528356;SRR1528380 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGGGUACGAAGAAUGUGAGCAUU - 24 |
Stem-loop(if miRNA) |
--UC                   UU   A      AG    UUU   --G     ---UU    C AG    AUU   -ACACCCC   A  GU    A     CUCACAUUCUUCGUACCCU  CUA UUUUUA  UAUU   UGA   UUUGA     UUUU G  CAUC   UGA        UUG GU  AAUG A     |||||||||||||||||||  ||| ||||||  ||||   |||   |||||     |||| |  ||||   |||        ||| ||  ||||     GAGUGUAAGAAGCAUGGGA  GGU AGAGGU  AUAA   ACU   AAAUU     AAAA C  GUAG   ACU        AAC CA  UUAC C UUAC                   GG   A      GA    ---   AGA     UUAAU    C CU    CAU   GAACCUAU   -  AU    U |
Stem-loop sequence | UCCUCACAUUCUUCGUACCCUUUCUAAUUUUUAAGUAUUUUUUGAGUUUGAUUUUUUCGAGCAUCAUUUGAACACCCCUUGAGUGUAAUGAACUCAUUUAACCAAUAUCCAAGUCAUACGAUGUCCCAAAAUAAUUUUAAAAGAUCAAAUAAGUGGAGAAUGGGGAGGGUACGAAGAAUGUGAGCAUU |