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BaseInfo

ncRNA ID novel_vvi_miR431
Species Vitis vinifera
Class miRNA
Genome position Chr12:9751242-9751429 [-]
Reference genome 12X
Source SRR1528356;SRR1528380
Length 24
Mature sequence(if miRNA) 1 - GAGGGUACGAAGAAUGUGAGCAUU - 24
Stem-loop(if miRNA) --UC                   UU   A      AG    UUU   --G     ---UU    C AG    AUU   -ACACCCC   A  GU    A
    CUCACAUUCUUCGUACCCU  CUA UUUUUA  UAUU   UGA   UUUGA     UUUU G  CAUC   UGA        UUG GU  AAUG A
    |||||||||||||||||||  ||| ||||||  ||||   |||   |||||     |||| |  ||||   |||        ||| ||  ||||
    GAGUGUAAGAAGCAUGGGA  GGU AGAGGU  AUAA   ACU   AAAUU     AAAA C  GUAG   ACU        AAC CA  UUAC C
UUAC                   GG   A      GA    ---   AGA     UUAAU    C CU    CAU   GAACCUAU   -  AU    U
Stem-loop sequence UCCUCACAUUCUUCGUACCCUUUCUAAUUUUUAAGUAUUUUUUGAGUUUGAUUUUUUCGAGCAUCAUUUGAACACCCCUUGAGUGUAAUGAACUCAUUUAACCAAUAUCCAAGUCAUACGAUGUCCCAAAAUAAUUUUAAAAGAUCAAAUAAGUGGAGAAUGGGGAGGGUACGAAGAAUGUGAGCAUU