ncRNA ID | novel_vvi_miR427 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:14315172-14315309 [+] |
Reference genome | 12X |
Source | SRR1528356 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGCAACAAUGUAUUACUUGGGC - 24 |
Stem-loop(if miRNA) |
---A    -        A   C     CAUAUU  AC  A              -----------UGU    -     A     GGGC AACAAUGU UUA UUGGG      AG  AU AUUACUACUCAAAA              AUGA AAUUC U     |||| |||||||| ||| |||||      ||  || ||||||||||||||              |||| |||||     UCUG UUGUUACA AAU AACCC      UC  UA UAAUGAUGAGUUUU              UAUU UUAAG G AUUC    A        C   C     ------  CU  C              UGGUGUGUAAAAUU    A     A |
Stem-loop sequence | AGGGCAACAAUGUAUUACUUGGGCAUAUUAGACAUAAUUACUACUCAAAAUGUAUGAAAUUCAUGAGAAUUAUUAUUUAAAAUGUGUGGUUUUUGAGUAGUAAUCAUUCCUCCCAACUAACACAUUGUUAGUCUCUUA |