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BaseInfo

ncRNA ID novel_vvi_miR426
Species Vitis vinifera
Class miRNA
Genome position Chr10:17760348-17760399 [-]
Reference genome 12X
Source SRR1528356
Length 24
Mature sequence(if miRNA) 29 - AUGCACUUGGACCAAACUUUGGAG - 52
Stem-loop(if miRNA) --  G     G     AA   UG  G
  AU CACUU GACCA  CUU  GA C
  || ||||| |||||  |||  || U
  UA GUGGA UUGGU  GAG  UU G
CU  G     G     -G   GU  A
Stem-loop sequence AUGCACUUGGACCAAACUUUGGAGCUGAUUUGGAGGUGGUUGAGGUGGAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002276454.3
ncRNA:24   GAGG-------UUUCAAACCAGGUUCACGUA   1
  ||==-------||||||||*|||||||||||
targets:1758   CUUUUUGCAAGAAAGUUUGCUCCAAGUGCAU   1788

1.5 PREDICTED: Vitis vinifera uncharacterized LOC100266878 (LOC100266878), mRNA NA coding protein psRNATarget