ncRNA ID | novel_vvi_miR421 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:13777902-13778127 [-] |
Reference genome | 12X |
Source | SRR1528356;SRR1528357;SRR1528362;SRR1528363;SRR1528365;SRR1528367;SRR1528368;SRR1528372;SRR1528374;SRR1528378;SRR1528383;SRR1528388;SRR1528391;SRR1528395;SRR1528406;SRR1528410;SRR1528411;SRR1528417 |
Length | 22 |
Mature sequence(if miRNA) | 205 - CUCAUGAUCUAGUUGUAGCUCA - 226 |
Stem-loop(if miRNA) |
--    UG   U         UC A       AUUUA   A        A     G                     CUA   U     UA              --       A   CUCA  AUC AGUUGUAGC  A AUUAGGG     UUU UUUAUUUU UUUUA UCCAAAAUGUUGUGUUUUGGA   GUU GGUUU  AAGAAAAAACAAGG  CAAAAUG U   ||||  ||| |||||||||  | |||||||     ||| |||||||| ||||| |||||||||||||||||||||   ||| |||||  ||||||||||||||  |||||||   GAGU  UAG UCAACGUUG  U UAAUCCC     AAA AAAUAAAA GAAGU GGGUUUUACAACAUAGAACCU   CAA CCAAA  UUCUUUUUUGUUCC  GUUUUAC G CG    GU   C         GA C       --GGA   A        C     G                     AAG   C     UA              CA       C |
Stem-loop sequence | CUCAUGAUCUAGUUGUAGCUCAAAUUAGGGAUUUAUUUAUUUAUUUUAUUUUAGUCCAAAAUGUUGUGUUUUGGACUAGUUUGGUUUUAAAGAAAAAACAAGGCAAAAUGAUGCCAUUUUGACCCUUGUUUUUUCUUAUAAACCCAACGAAUCCAAGAUACAACAUUUUGGGGUGAAGCAAAAUAAAAAAAAGGCCCUAAUCUAGGUUGCAACUCGAUUGUGAGGC |