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BaseInfo

ncRNA ID novel_vvi_miR421
Species Vitis vinifera
Class miRNA
Genome position Chr9:13777902-13778127 [-]
Reference genome 12X
Source SRR1528356;SRR1528357;SRR1528362;SRR1528363;SRR1528365;SRR1528367;SRR1528368;SRR1528372;SRR1528374;SRR1528378;SRR1528383;SRR1528388;SRR1528391;SRR1528395;SRR1528406;SRR1528410;SRR1528411;SRR1528417
Length 22
Mature sequence(if miRNA) 205 - CUCAUGAUCUAGUUGUAGCUCA - 226
Stem-loop(if miRNA) --    UG   U         UC A       AUUUA   A        A     G                     CUA   U     UA              --       A
  CUCA  AUC AGUUGUAGC  A AUUAGGG     UUU UUUAUUUU UUUUA UCCAAAAUGUUGUGUUUUGGA   GUU GGUUU  AAGAAAAAACAAGG  CAAAAUG U
  ||||  ||| |||||||||  | |||||||     ||| |||||||| ||||| |||||||||||||||||||||   ||| |||||  ||||||||||||||  |||||||
  GAGU  UAG UCAACGUUG  U UAAUCCC     AAA AAAUAAAA GAAGU GGGUUUUACAACAUAGAACCU   CAA CCAAA  UUCUUUUUUGUUCC  GUUUUAC G
CG    GU   C         GA C       --GGA   A        C     G                     AAG   C     UA              CA       C
Stem-loop sequence CUCAUGAUCUAGUUGUAGCUCAAAUUAGGGAUUUAUUUAUUUAUUUUAUUUUAGUCCAAAAUGUUGUGUUUUGGACUAGUUUGGUUUUAAAGAAAAAACAAGGCAAAAUGAUGCCAUUUUGACCCUUGUUUUUUCUUAUAAACCCAACGAAUCCAAGAUACAACAUUUUGGGGUGAAGCAAAAUAAAAAAAAGGCCCUAAUCUAGGUUGCAACUCGAUUGUGAGGC