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BaseInfo

ncRNA ID	novel_vvi_miR410
Species	Vitis vinifera
Class	miRNA
Genome position	Chr8:18066873-18066981 [+]
Reference genome	12X
Source	SRR1528356;SRR1528380
Length	24
Mature sequence(if miRNA)	86 - AUGGGAACUCAUCUCUUGAAGAGA - 109
Stem-loop(if miRNA)	--           C        U       UUUUUUUUUUC        U    U   UUUUCAAGAGA GAGUUCCC UGAGGAA           UUUUUUAA AAUU G   ||||||||||| |||||||| |||||||           |||||||| ||||   AGAAGUUCUCU CUCAAGGG ACUUUUU           AAAAAAUU UUAA G AG           A        U       -UUAUAUAUAA        U    G
Stem-loop sequence	UUUUCAAGAGACGAGUUCCCUUGAGGAAUUUUUUUUUUCUUUUUUAAUAAUUUGGGAAUUUUUAAAAAAAAUAUAUAUUUUUUUCAUGGGAACUCAUCUCUUGAAGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA147142.1	ncRNA:24   AGAG----------AAGUUCUCUACUCAAGGGUA   1   ||||----------|||||||||||||||=|||| targets:2249   UCUCAAGAAUUGUAUUCAAGAGAUGAGUUUCCAU   2282 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_8472_Transcript_6/6_Confidence_0.357.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010663583.2	ncRNA:24   AGAG----------AAGUUCUCUACUCAAGGGUA   1   ||||----------|||||||||||||||=|||| targets:1835   UCUCAAGAAUUGUAUUCAAGAGAUGAGUUUCCAU   1868 Target Full Sequence	1.5	PREDICTED: Vitis vinifera protein SUPPRESSOR OF PHYA-105 1 (LOC100256812), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010663582.2	ncRNA:24   AGAG----------AAGUUCUCUACUCAAGGGUA   1   ||||----------|||||||||||||||=|||| targets:1866   UCUCAAGAAUUGUAUUCAAGAGAUGAGUUUCCAU   1899 Target Full Sequence	1.5	PREDICTED: Vitis vinifera protein SUPPRESSOR OF PHYA-105 1 (LOC100256812), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_002276649.4	ncRNA:24   AGAG----------AAGUUCUCUACUCAAGGGUA   1   ||||----------|||||||||||||||=|||| targets:1935   UCUCAAGAAUUGUAUUCAAGAGAUGAGUUUCCAU   1968 Target Full Sequence	1.5	PREDICTED: Vitis vinifera protein SUPPRESSOR OF PHYA-105 1 (LOC100256812), transcript variant X1, mRNA	NA	coding protein	psRNATarget