| ncRNA ID | novel_vvi_miR400 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr7:15873427-15873555 [-] |
| Reference genome | 12X |
| Source | SRR1528356;SRR1528357;SRR1528362;SRR1528370;SRR1528371;SRR1528372;SRR1528374;SRR1528375;SRR1528407 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - UUUUAAAGAUGUUUAGAUAGAACU - 24 |
| Stem-loop(if miRNA) |
-- C --------- AA A U U UUUUAUCUAAACAUC UUAAAAGUUGUA UAAA AUGUUUUUA GUAUUUAAAA AGU U ||||||||||||||| |||||||||||| |||| ||||||||| |||||||||| ||| AAGAUAGAUUUGUAG AAUUUUCAACAU AUUU UACGAAAAU CAUAAAUUUU UCA A UC A AAAUUUAAA AC - - U |
| Stem-loop sequence | UUUUAUCUAAACAUCCUUAAAAGUUGUAUAAAAAAUGUUUUUAAGUAUUUAAAAUAGUUUAUACUUUUUAAAUACUAAAAGCAUCAUUUAAAAUUUAAAUACAACUUUUAAAGAUGUUUAGAUAGAACU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA141990.1 |
|
2.5 | TSA: Vitis vinifera Locus_1171_Transcript_6/10_Confidence_0.200.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA142913.1 |
|
2.5 | TSA: Vitis vinifera Locus_1345_Transcript_3/4_Confidence_0.273.Vivi mRNA sequence | NA | coding protein | psRNATarget |