| ncRNA ID | novel_vvi_miR397 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr16:17247195-17247300 [-] |
| Reference genome | 12X |
| Source | SRR1528355;SRR1528357;SRR1528358;SRR1528359;SRR1528361;SRR1528363;SRR1528371;SRR1528374;SRR1528378;SRR1528380;SRR1528381;SRR1528384;SRR1049289;SRR1528391;SRR1528396;SRR1528403;SRR1528407;SRR1528411;SRR1528412;SRR1528416 |
| Length | 21 |
| Mature sequence(if miRNA) | 86 - UCCAAAGGGAUCGCAUUGAUC - 106 |
| Stem-loop(if miRNA) |
-- A C U C UU UCUUCCACCUCUCUUA AUCA UCC AAGGGAU GCAU GAUCC AUGG A CCAGACU U ||| ||||||| |||| ||||| |||| | ||||||| AGG UUCCCUA CGUA CUAGG UACC U GGUCUGA A CA A U - U CU -----------UUUCC AACA |
| Stem-loop sequence | UCCAAAGGGAUCGCAUUGAUCCCAUGGUUAUCUUCCACCUCUCUUACCAGACUAUCAUAACAAAGUCUGGCCUUUUUCCCAUUGGAUCAUGCUAUCCCUUAGGAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA142818.1 |
|
0.0 | TSA: Vitis vinifera Locus_49986_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA149142.1 |
|
0.0 | TSA: Vitis vinifera Locus_16493_Transcript_3/3_Confidence_0.500.Vivi mRNA sequence | NA | coding protein | psRNATarget |