ncRNA ID | novel_vvi_miR395 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:4265143-4265205 [+] |
Reference genome | 12X |
Source | SRR1528355;SRR1528358;SRR1528359;SRR1528369;SRR1528381;SRR1528384;SRR1528391;SRR1528392;SRR1528396;SRR1528398;SRR1528401;SRR1528403;SRR1528405;SRR1528410;SRR1528415;SRR890731 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCAAAGGGAUCGCAUUGAUC - 21 |
Stem-loop(if miRNA) |
--           C    U     C   CU U   UCCAAAGGGAU GCAU GAUCC AAA  C C   ||||||||||| |||| ||||| |||  | C   AGGUUUCCCUA CGUA CUAGG UUU  G A UU           U    -     -   CU U |
Stem-loop sequence | UCCAAAGGGAUCGCAUUGAUCCCAAACUCUCCAUGUCUUUGGAUCAUGCUAUCCCUUUGGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA142818.1 |
|
0.0 | TSA: Vitis vinifera Locus_49986_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA149142.1 |
|
0.0 | TSA: Vitis vinifera Locus_16493_Transcript_3/3_Confidence_0.500.Vivi mRNA sequence | NA | coding protein | psRNATarget |