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BaseInfo

ncRNA ID	novel_vvi_miR390
Species	Vitis vinifera
Class	miRNA
Genome position	Chr15:19955011-19955120 [+]
Reference genome	12X
Source	SRR1528354
Length	21
Mature sequence(if miRNA)	90 - UUGAUUCGGCAAAAUAUGAGC - 110
Stem-loop(if miRNA)	--   C        -    UUUU     -A   --   CCCA   -   C  -UC   C   UCA AUUUUGUU AGUC    UGAGA  AGA  GCU    ACU CUC GU   CAU U   ||| |||||||| ||||    |||||  |||  |||    ||| ||| ||   |||   AGU UAAAACGG UUAG    AUUCU  UCU  CGA    UGA GAG CG   GUA A CG   A        C    -UUU     CG   CA   CUAG   U   -  UUA   G
Stem-loop sequence	UCACAUUUUGUUAGUCUUUUUGAGAAAGAGCUCCCAACUCUCCGUUCCAUCUAGAUGAUUGCGAGUAGUGAUCAGCACUCUGCUCUUAUUUGAUUCGGCAAAAUAUGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA164335.1	ncRNA:21   CGAGUAUAAAACGGCUUAGUU   1   |=|||*||||||||*|||||| targets:831   GUUCACAUUUUGCCCAAUCAA   851 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5955_Transcript_5/6_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA168859.1	ncRNA:21   CGAGUAUAAAACGGCUUAGUU   1   *=|=|*||||||||||||||= targets:2755   AUUUAAAUUUUGCCGAAUCAG   2775 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_4077_Transcript_10/10_Confidence_0.643.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA168860.1	ncRNA:21   CGAGUAUAAAACGGCUUAGUU   1   *=|=|*||||||||||||||= targets:3385   AUUUAAAUUUUGCCGAAUCAG   3405 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_4077_Transcript_9/10_Confidence_0.667.Vivi mRNA sequence	NA	coding protein	psRNATarget