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BaseInfo

ncRNA ID	novel_vvi_miR385
Species	Vitis vinifera
Class	miRNA
Genome position	Chr14:1213451-1213525 [+]
Reference genome	12X
Source	SRR1048204
Length	23
Mature sequence(if miRNA)	1 - AGAAACACUUCCUAGAAUCACUG - 23
Stem-loop(if miRNA)	--              G   C          A        AGAAACACUUCCUA AAU ACUGUCAAAC UAUUCU   |||||||||||||| ||| |||||||||| |||||U   UCUUUGUGAAGGAU UUA UGACAGUUUG GUGAGU GA              A   A          C
Stem-loop sequence	AGAAACACUUCCUAGAAUCACUGUCAAACAUAUUCUUUGAGUGCGUUUGACAGUAAUUAUAGGAAGUGUUUCUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA166769.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||*|||||||||||||||| targets:4594   UAGUGAAUCUAGGAAGUGUUUCU   4616 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_5976_Transcript_9/10_Confidence_0.484.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA165748.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   ||||||||=||||||||||||=| targets:1695   CAGUGAUUUUAGGAAGUGUUUUU   1717 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1543_Transcript_6/7_Confidence_0.611.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA170094.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||=||||||||||||=| targets:4083   UAGUGAUUUUAGGAAGUGUUUUU   4105 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1667_Transcript_4/5_Confidence_0.583.Vivi mRNA sequence	NA	coding protein	psRNATarget
FQ381116.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   ||||||||=||||||||*||||| targets:1252   CAGUGAUUUUAGGAAGUAUUUCU   1274 Target Full Sequence	2.5	Vitis vinifera clone SS0ACG1YF21	NA	coding protein	psRNATarget
KA144717.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   ||||||||=||||||||*||||| targets:1303   CAGUGAUUUUAGGAAGUAUUUCU   1325 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1426_Transcript_1/6_Confidence_0.556.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159796.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   ||||||||=||||||||||||*| targets:2593   CAGUGAUUUUAGGAAGUGUUUAU   2615 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3174_Transcript_7/8_Confidence_0.565.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA153142.1	ncRNA:23   GU--CACUAAGAUCCUUCACAAAGA   1   ||--||||||=||||||||||||=| targets:89   CACCGUGAUUUUAGGAAGUGUUUUU   113 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_44328_Transcript_3/3_Confidence_0.714.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA170970.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||=|||*|||||||||| targets:163   UAGUGAUUUUAGAAAGUGUUUCU   185 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_17927_Transcript_6/6_Confidence_0.500.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA165408.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||=||*||||||||||| targets:2997   UAGUGAUUUUAAGAAGUGUUUCU   3019 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_14018_Transcript_1/3_Confidence_0.714.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA165409.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||=||*||||||||||| targets:3086   UAGUGAUUUUAAGAAGUGUUUCU   3108 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_14018_Transcript_2/3_Confidence_0.714.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA170969.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||=|||*|||||||||| targets:163   UAGUGAUUUUAGAAAGUGUUUCU   185 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_17927_Transcript_3/6_Confidence_0.611.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA154839.1	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||=||*||||||||||| targets:2780   UAGUGAUUUUAAGAAGUGUUUCU   2802 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_4953_Transcript_6/7_Confidence_0.478.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002270170.3	ncRNA:23   GUCACUAAGAUCCUUCACAAAGA   1   =|||||||*|*|||||||||||| targets:3936   UAGUGAUUAUCGGAAGUGUUUCU   3958 Target Full Sequence	2.5	PREDICTED: Vitis vinifera WD repeat-containing protein 44 (LOC100264924), mRNA	NA	coding protein	psRNATarget