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BaseInfo

ncRNA ID novel_vvi_miR380
Species Vitis vinifera
Class miRNA
Genome position Chr2:2567963-2568042 [-]
Reference genome 12X
Source SRR1528353;SRR1528365;SRR1528368;SRR1528369;SRR1528375;SRR1049290
Length 18
Mature sequence(if miRNA) 63 - AGUUACUAAUUCAUGAUC - 80
Stem-loop(if miRNA) AGUUACUAA       UCUGACAUAUAU     GAAAACUUCAU
         UUCAUGA            AGAAU           U
         |||||||            |||||           C
         AAGUAUU            UUAAG           U
AGUUUCUGA       -----------U     AGUAUCUUAGU
Stem-loop sequence AGUUACUAAUUCAUGAUCUGACAUAUAUAGAAUGAAAACUUCAUUCUUGAUUCUAUGAGAAUUUUUAUGAAAGUCUUUGA