| ncRNA ID | novel_vvi_miR379 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr18:19860980-19861122 [-] |
| Reference genome | 12X |
| Source | SRR1528353 |
| Length | 21 |
| Mature sequence(if miRNA) | 123 - AUUGAUUUUUAUUAGGAGCCU - 143 |
| Stem-loop(if miRNA) |
-- - CAUCCUCACCA U CCACCACCACCUCUCUCUUUCUCUCU AUUGAUUUUUAUUAGGAGCCUUUAC UCU UCAGCC CA C ||||||||||||||||||||||||| ||| |||||| || U UGACUAAGAAUAAUUCUCGGAGGUG AGA AGUUGG GU C UU U ----------- U CAUCUUUUCUCUCUAUCUCUCUCUCU |
| Stem-loop sequence | AUUGAUUUUUAUUAGGAGCCUUUACUCUCAUCCUCACCAUCAGCCUCACCACCACCACCUCUCUCUUUCUCUCUCUCUCUCUCUCUCUAUCUCUCUUUUCUACUGUGGUUGAAGAUGUGGAGGCUCUUAAUAAGAAUCAGUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA162854.1 |
|
2.5 | TSA: Vitis vinifera Locus_9334_Transcript_6/8_Confidence_0.389.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA174201.1 |
|
3.0 | TSA: Vitis vinifera Locus_1309_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |