ncRNA ID | novel_vvi_miR377 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:13887182-13887295 [+] |
Reference genome | 12X |
Source | SRR1528353;SRR1528367;SRR1528376;SRR1528392;SRR1528410;SRR1528417;SRR2029784 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCACCGCUGCUAGAGCUCGCG - 21 |
Stem-loop(if miRNA) |
--      C  C            UC    C  C     ----  -C        CACAA  G   UCACCG UG UAGAGCUCGCGA  UCCU UA GUGUU    GG  CCUACCUG     AG A   |||||| || ||||||||||||  |||| || |||||    ||  ||||||||     ||   AGUGGU AC AUCUCGAGUGCU  AGGA AU CACAG    CC  GGAUGGAU     UC C GA      U  A            --    U  -     GAGC  UU        ----C  A |
Stem-loop sequence | UCACCGCUGCUAGAGCUCGCGAUCUCCUCUACGUGUUGGCCCUACCUGCACAAAGGACACUCUAGGUAGGUUCCCGAGGACACUAUAGGAUCGUGAGCUCUAACAUUGGUGAAG |