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BaseInfo

ncRNA ID novel_vvi_miR377
Species Vitis vinifera
Class miRNA
Genome position Chr18:13887182-13887295 [+]
Reference genome 12X
Source SRR1528353;SRR1528367;SRR1528376;SRR1528392;SRR1528410;SRR1528417;SRR2029784
Length 21
Mature sequence(if miRNA) 1 - UCACCGCUGCUAGAGCUCGCG - 21
Stem-loop(if miRNA) --      C  C            UC    C  C     ----  -C        CACAA  G
  UCACCG UG UAGAGCUCGCGA  UCCU UA GUGUU    GG  CCUACCUG     AG A
  |||||| || ||||||||||||  |||| || |||||    ||  ||||||||     ||
  AGUGGU AC AUCUCGAGUGCU  AGGA AU CACAG    CC  GGAUGGAU     UC C
GA      U  A            --    U  -     GAGC  UU        ----C  A
Stem-loop sequence UCACCGCUGCUAGAGCUCGCGAUCUCCUCUACGUGUUGGCCCUACCUGCACAAAGGACACUCUAGGUAGGUUCCCGAGGACACUAUAGGAUCGUGAGCUCUAACAUUGGUGAAG