ncRNA ID | lus-miR172j |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - GCAGCAUCAUCAAGAUUCCCA - NA |
Stem-loop(if miRNA) |
    U        ----------                C   U    ------CC     UGAAUGAUUUGGGCAAAAGUGAAAAAAAA UGAU GCCGCUGC          AGCAUCAUCAAGAUUC CAA ACCC        GCCCA                             A |||| ||||||||          |||||||||||||||| ||| ||||        ||||| AUUG CGGUGACG          UCGUAGUAGUUCUAAG GUU UGGG        UUUCA                             A     U        AACGAUAACC                U   -    UGUUUCCG     AUUUUAUUUUCUCGAAUAGAAAUAUUCGA |
Stem-loop sequence | UGAUUGCCGCUGCAGCAUCAUCAAGAUUCCCAAUACCCCCGCCCAUGAAUGAUUUGGGCAAAAGUGAAAAAAAAAAAGCUUAUAAAGAUAAGCUCUUUUAUUUUAACUUUGCCUUUGUGGGUUUGUGAAUCUUGAUGAUGCUCCAAUAGCAAGCAGUGGCUGUUA |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |