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BaseInfo

ncRNA ID lus-miR172j
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - GCAGCAUCAUCAAGAUUCCCA - NA
Stem-loop(if miRNA)     U        ----------                C   U    ------CC     UGAAUGAUUUGGGCAAAAGUGAAAAAAAA
UGAU GCCGCUGC          AGCAUCAUCAAGAUUC CAA ACCC        GCCCA                             A
|||| ||||||||          |||||||||||||||| ||| ||||        |||||
AUUG CGGUGACG          UCGUAGUAGUUCUAAG GUU UGGG        UUUCA                             A
    U        AACGAUAACC                U   -    UGUUUCCG     AUUUUAUUUUCUCGAAUAGAAAUAUUCGA
Stem-loop sequence UGAUUGCCGCUGCAGCAUCAUCAAGAUUCCCAAUACCCCCGCCCAUGAAUGAUUUGGGCAAAAGUGAAAAAAAAAAAGCUUAUAAAGAUAAGCUCUUUUAUUUUAACUUUGCCUUUGUGGGUUUGUGAAUCUUGAUGAUGCUCCAAUAGCAAGCAGUGGCUGUUA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).