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BaseInfo

ncRNA ID	novel_vvi_miR366
Species	Vitis vinifera
Class	miRNA
Genome position	Chr12:5542404-5542488 [-]
Reference genome	12X
Source	SRR1528352;SRR1528353;SRR1528360;SRR1528363;SRR1528364;SRR1528365;SRR1528373;SRR1528376;SRR1528380;SRR1528381;SRR1528391;SRR1528392;SRR1528401;SRR1528410;SRR1528415
Length	21
Mature sequence(if miRNA)	1 - UUGAGCCGCGUCAAUAUCUCC - 21
Stem-loop(if miRNA)	--             C       U  AG          -  GA   AGGUAUUGGCGUG CUCAAUU AA  ACAUGGUUAG AU  A   ||||||||||||| ||||||| ||  |||||||||| ||   UCUAUAACUGCGC GAGUUAG UU  UGUACCGAUU UA  G CC             C       U  AG          A  GA
Stem-loop sequence	AGGUAUUGGCGUGCCUCAAUUUAAAGACAUGGUUAGAUGAAGAGAUAUUAGCCAUGUGAUUUGAUUGAGCCGCGUCAAUAUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA139855.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   ||||||||||||||||||||| targets:124   GGAGAUAUUGACGCGGCUCAA   144 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_55207_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
FQ387249.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   ||=|||||||=|||||||||| targets:125   GGGGAUAUUGGCGCGGCUCAA   145 Target Full Sequence	2.5	Vitis vinifera clone SS0AEB27YD06	NA	coding protein	psRNATarget
KA156503.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1589   AGGGAUAUUGGCGCGGCUCAA   1609 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_4453_Transcript_3/8_Confidence_0.250.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010664124.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1664   AGGGAUAUUGGCGCGGCUCAA   1684 Target Full Sequence	2.5	PREDICTED: Vitis vinifera scarecrow-like protein 22 (LOC100252271), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010663377.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1595   AGGGAUAUUGGCGCGGCUCAA   1615 Target Full Sequence	2.5	PREDICTED: Vitis vinifera scarecrow-like protein 27 (LOC100267664), mRNA	NA	coding protein	psRNATarget
KA147554.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1617   AGGGAUAUUGGCGCGGCUCAA   1637 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_15685_Transcript_1/2_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010664120.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1852   AGGGAUAUUGGCGCGGCUCAA   1872 Target Full Sequence	2.5	PREDICTED: Vitis vinifera scarecrow-like protein 22 (LOC100252271), transcript variant X1, mRNA	NA	coding protein	psRNATarget
FQ396308.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   ||*|||||||=|||||||||| targets:723   GGCGAUAUUGGCGCGGCUCAA   743 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA10YI14	NA	coding protein	psRNATarget
XM_002268409.4	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   ||*|||||||=|||||||||| targets:738   GGCGAUAUUGGCGCGGCUCAA   758 Target Full Sequence	2.5	PREDICTED: Vitis vinifera scarecrow-like protein 15 (LOC100251313), mRNA	NA	coding protein	psRNATarget