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BaseInfo

ncRNA ID lus-miR172i
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - GGAAUCUUGAUGAUGCUGCAG - NA
Stem-loop(if miRNA)   C  C  C    UA   G                A   -C     CC   GACUACCA     CU
AG CA UG UUGC  CUG AGCAUCAUCAAGAUUC CAA  CCCAC  ACG        AAAAG  U
|| || || ||||  ||| |||||||||||||||| |||  |||||  |||        |||||  U
UC GU AC AACG  GAC UCGUAGUAGUUCUAAG GUU  GGGUG  UGC        UUUUC  C
  C  C  U    GC   G                G   AU     -U   AGUACUAC     UA
Stem-loop sequence AGCCACUGCUUGCUACUGGAGCAUCAUCAAGAUUCACAACCCCACCCACGGACUACCAAAAAGCUUUCAUCUUUUCAUCAUGACGUUGUGGGUAUUGGGAAUCUUGAUGAUGCUGCAGCGGCAAUCACUGCCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).