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BaseInfo

ncRNA ID novel_vvi_miR364
Species Vitis vinifera
Class miRNA
Genome position Chr12:17122012-17122080 [-]
Reference genome 12X
Source SRR1528352;SRR1528353;SRR1528357;SRR1528358;SRR1528359;SRR1528369;SRR1528378;SRR1528385;SRR1528409;SRR890731
Length 20
Mature sequence(if miRNA) 50 - UUGGCAUUCUGUCCACCUCC - 69
Stem-loop(if miRNA) --       U   U         UGCACAUCAUG
  UUGGCAU CUG CCACCUCCA           G
  ||||||| ||| |||||||||           G
  AACCGUA GAC GGUGGAGGU           U
GA       C   C         UUUCUUAUAUC
Stem-loop sequence UUGGCAUUCUGUCCACCUCCAUGCACAUCAUGGGUCUAUAUUCUUUUGGAGGUGGCCAGCAUGCCAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010657682.2
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1214   GGAGGUUGACAGAAUGCCAA   1233

1.0 PREDICTED: Vitis vinifera F-box only protein 6 (LOC100242085), mRNA NA coding protein psRNATarget