ncRNA ID | novel_vvi_miR364 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:17122012-17122080 [-] |
Reference genome | 12X |
Source | SRR1528352;SRR1528353;SRR1528357;SRR1528358;SRR1528359;SRR1528369;SRR1528378;SRR1528385;SRR1528409;SRR890731 |
Length | 20 |
Mature sequence(if miRNA) | 50 - UUGGCAUUCUGUCCACCUCC - 69 |
Stem-loop(if miRNA) |
--       U   U         UGCACAUCAUG   UUGGCAU CUG CCACCUCCA           G   ||||||| ||| |||||||||           G   AACCGUA GAC GGUGGAGGU           U GA       C   C         UUUCUUAUAUC |
Stem-loop sequence | UUGGCAUUCUGUCCACCUCCAUGCACAUCAUGGGUCUAUAUUCUUUUGGAGGUGGCCAGCAUGCCAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010657682.2 |
|
1.0 | PREDICTED: Vitis vinifera F-box only protein 6 (LOC100242085), mRNA | NA | coding protein | psRNATarget |