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BaseInfo

ncRNA ID	novel_vvi_miR361
Species	Vitis vinifera
Class	miRNA
Genome position	Chr11:16185276-16185405 [+]
Reference genome	12X
Source	SRR1528352
Length	22
Mature sequence(if miRNA)	1 - CAUGAAGAGGUAGAGAGGGUGG - 22
Stem-loop(if miRNA)	--     A    U    A    G    U               U     ---C UU   AUCAAGCAUU   CAUGA GAGG AGAG GGGU GAAU GAGCCAAGGAUGACU GCCGU    C  UGC          G   ||||| |||| |||| |||| |||| ||||||||||||||| |||||    |  |||   GUACU CUCC UCUC CCCG UUUA CUCGGUUCUUAUUGA CGGCA    C  GGG          A GC     -    U    -    G    -               U     CGUA --   UCAAUUUCGA
Stem-loop sequence	CAUGAAGAGGUAGAGAGGGUGGAAUUGAGCCAAGGAUGACUUGCCGUCCUUUGCAUCAAGCAUUGAAGCUUUAACUGGGCAUGCACGGCUAGUUAUUCUUGGCUCAUUUGGCCCCUCUUCCUCUCAUGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA169609.1	ncRNA:22   GGUGGGAGAGAUGGAGAAGUAC   1   |=*|||||||||||*||||||* targets:2671   CUUCCCUCUCUACCACUUCAUC   2692 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_2458_Transcript_3/10_Confidence_0.308.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA169608.1	ncRNA:22   GGUGGGAGAGAUGGAGAAGUAC   1   |=*|||||||||||*||||||* targets:2109   CUUCCCUCUCUACCACUUCAUC   2130 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_2458_Transcript_1/10_Confidence_0.288.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA169610.1	ncRNA:22   GGUGGGAGAGAUGGAGAAGUAC   1   |=*|||||||||||*||||||* targets:1990   CUUCCCUCUCUACCACUUCAUC   2011 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_2458_Transcript_5/10_Confidence_0.288.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142593.1	ncRNA:22   GGUGGGAGAGAUGGAGAAGUAC   1   ||-||||||||*|||||||||* targets:78   CC-CCCUCUCUCCCUCUUCAUA   98 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_35913_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002278993.4	ncRNA:22   GGUGGGAGAGAUGGAGAAGUAC   1   ||-||||||||*|||||||||* targets:83   CC-CCCUCUCUCCCUCUUCAUA   103 Target Full Sequence	2.5	PREDICTED: Vitis vinifera LOB domain-containing protein 15 (LOC100251929), mRNA	NA	coding protein	psRNATarget
FQ386881.1	ncRNA:22   GGUGGGAGAGAUGGAGAAGUAC   1   ||-||||||||*|||||||||* targets:43   CC-CCCUCUCUCCCUCUUCAUA   63 Target Full Sequence	2.5	Vitis vinifera clone SS0AEB28YH02	NA	coding protein	psRNATarget