ncRNA ID | novel_vvi_miR360 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:14277978-14278039 [+] |
Reference genome | 12X |
Source | SRR1528352;SRR1528364 |
Length | 24 |
Mature sequence(if miRNA) | 39 - GGACAAUAUCUAUACAGUUGGGUG - 62 |
Stem-loop(if miRNA) |
--      CU   U          A  CUAG   CCUAAC  UGU GAUAUUGUCC CU    G   ||||||  ||| |||||||||| ||   GGGUUG  AUA CUAUAACAGG GA    U GU      AC   U          C  AACU |
Stem-loop sequence | CCUAACCUUGUUGAUAUUGUCCACUCUAGGUUCAAAGCGGACAAUAUCUAUACAGUUGGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA158923.1 |
|
0.0 | TSA: Vitis vinifera Locus_60651_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA137628.1 |
|
2.0 | TSA: Vitis vinifera Locus_1147_Transcript_10/25_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |