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BaseInfo

ncRNA ID novel_vvi_miR357
Species Vitis vinifera
Class miRNA
Genome position Chr9:5984686-5984769 [+]
Reference genome 12X
Source SRR1528352;SRR1528372
Length 21
Mature sequence(if miRNA) 1 - UUCUUAGAACCAAGGGCACCC - 21
Stem-loop(if miRNA) --     A       -   CA   --UUAAU    CCCCGACU   A
  UUCUU GAACCAA GGG  CCC       CCUU        UCG U
  ||||| ||||||| |||  |||       ||||        |||
  AAGAA CUUGGUU CCC  GGG       GGAA        AGC U
GA     -       A   -A   UAACUAU    -----UAU   C
Stem-loop sequence UUCUUAGAACCAAGGGCACCCUUAAUCCUUCCCCGACUUCGAUUCCGAUAUAAGGUAUCAAUGGGACCCAUUGGUUCAAGAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019216346.1
ncRNA:21   CCCACGGGAACCAAGAUUCUU   1
  ||||||=|||||||||||||*
targets:855   GGGUGCUCUUGGUUCUAAGAN   875

2.0 PREDICTED: Vitis vinifera uncharacterized mitochondrial protein AtMg00810-like (LOC109121619), mRNA NA coding protein psRNATarget