ncRNA ID | novel_vvi_miR357 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:5984686-5984769 [+] |
Reference genome | 12X |
Source | SRR1528352;SRR1528372 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCUUAGAACCAAGGGCACCC - 21 |
Stem-loop(if miRNA) |
--     A       -   CA   --UUAAU    CCCCGACU   A   UUCUU GAACCAA GGG  CCC       CCUU        UCG U   ||||| ||||||| |||  |||       ||||        |||   AAGAA CUUGGUU CCC  GGG       GGAA        AGC U GA     -       A   -A   UAACUAU    -----UAU   C |
Stem-loop sequence | UUCUUAGAACCAAGGGCACCCUUAAUCCUUCCCCGACUUCGAUUCCGAUAUAAGGUAUCAAUGGGACCCAUUGGUUCAAGAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019216346.1 |
|
2.0 | PREDICTED: Vitis vinifera uncharacterized mitochondrial protein AtMg00810-like (LOC109121619), mRNA | NA | coding protein | psRNATarget |