ncRNA ID | novel_vvi_miR355 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:17018948-17019013 [-] |
Reference genome | 12X |
Source | SRR1528352;SRR1528358;SRR1528365;SRR1528370;SRR1528372;SRR1528374;SRR1528377;SRR1528378;SRR1528386;SRR1528388;SRR1528391;SRR1528393;SRR1528397;SRR1528408 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAUCGGAUAAAGGAAAAAGUUCC - 24 |
Stem-loop(if miRNA) |
--         UC               UAUCA   AACUUUUUC  UUGUUUGAUGUGGGA     C   |||||||||  |||||||||||||||   UUGAAAAAG  AAUAGGCUACACCCU     A CC         GA               CACUG |
Stem-loop sequence | AACUUUUUCUCUUGUUUGAUGUGGGAUAUCACAGUCACUCCCACAUCGGAUAAAGGAAAAAGUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA148682.1 |
|
1.0 | TSA: Vitis vinifera Locus_17835_Transcript_3/6_Confidence_0.467.Vivi mRNA sequence | NA | coding protein | psRNATarget |