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BaseInfo

ncRNA ID novel_vvi_miR355
Species Vitis vinifera
Class miRNA
Genome position Chr9:17018948-17019013 [-]
Reference genome 12X
Source SRR1528352;SRR1528358;SRR1528365;SRR1528370;SRR1528372;SRR1528374;SRR1528377;SRR1528378;SRR1528386;SRR1528388;SRR1528391;SRR1528393;SRR1528397;SRR1528408
Length 24
Mature sequence(if miRNA) 1 - ACAUCGGAUAAAGGAAAAAGUUCC - 24
Stem-loop(if miRNA) --         UC               UAUCA
  AACUUUUUC  UUGUUUGAUGUGGGA     C
  |||||||||  |||||||||||||||
  UUGAAAAAG  AAUAGGCUACACCCU     A
CC         GA               CACUG
Stem-loop sequence AACUUUUUCUCUUGUUUGAUGUGGGAUAUCACAGUCACUCCCACAUCGGAUAAAGGAAAAAGUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA148682.1
ncRNA:24   CCUUGAAAAAGGAAAUAGGCUACA   1
  **||*||||*||||||||||||||
targets:1014   CAAAAUUUUCCCUUUAUCCGAUGU   1037

1.0 TSA: Vitis vinifera Locus_17835_Transcript_3/6_Confidence_0.467.Vivi mRNA sequence NA coding protein psRNATarget