ncRNA ID | novel_vvi_miR353 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr7:18344008-18344080 [+] |
Reference genome | 12X |
Source | SRR1528352;SRR1528356;SRR1528358;SRR1528380 |
Length | 24 |
Mature sequence(if miRNA) | 50 - UUAGAAAGACUAGAAACACUUCCU - 73 |
Stem-loop(if miRNA) |
--            AC        C G      UUU   GAAGUGUUUCUA  CUUUCUAA A UUGAAG   U   ||||||||||||  |||||||| | ||||||   U   CUUCACAAAGAU  GAAAGAUU U AACUUU   U UC            CA        A G      CUA |
Stem-loop sequence | GAAGUGUUUCUAACCUUUCUAACAGUUGAAGUUUUUUAUCUUUCAAGUAUUAGAAAGACUAGAAACACUUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA160601.1 |
|
1.5 | TSA: Vitis vinifera Locus_2766_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA138578.1 |
|
1.5 | TSA: Vitis vinifera Locus_5525_Transcript_9/10_Confidence_0.405.Vivi mRNA sequence | NA | coding protein | psRNATarget |