ncRNA ID | novel_vvi_miR350 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr6:21213319-21213396 [-] |
Reference genome | 12X |
Source | SRR1528352 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUCAAAGAGAUGAAAAUGCA - 21 |
Stem-loop(if miRNA) |
--                                  - U   CAUUUUCAUCUCUUUGAUUGAAAUAAAUUUGAAG C C   |||||||||||||||||||||||||||||||||| | U   GUAAAAGUAGAGAAACUAACUUUAUUUAAACUUC G A AC                                  U G |
Stem-loop sequence | CAUUUUCAUCUCUUUGAUUGAAAUAAAUUUGAAGCUCUAGGUCUUCAAAUUUAUUUCAAUCAAAGAGAUGAAAAUGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA155303.1 |
|
1.5 | TSA: Vitis vinifera Locus_10161_Transcript_3/4_Confidence_0.625.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA155304.1 |
|
1.5 | TSA: Vitis vinifera Locus_10161_Transcript_4/4_Confidence_0.625.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_002271223.4 |
|
2.5 | PREDICTED: Vitis vinifera stachyose synthase (LOC100245269), mRNA | NA | coding protein | psRNATarget |