ncRNA ID | lus-miR172g |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - GGAAUCUUGAUGAUGCUGCAU - NA |
Stem-loop(if miRNA) |
AUUAAC      A U         G                ACAGAU   GCUGUGGUACUAUUAU       AGCCAU G UUGCUGAUG AGCAUCAUCAAGAUUC      CUA                A       |||||| | ||||||||| ||||||||||||||||      |||                G       UCGGUA C AACGGCUAC UCGUAGUAGUUCUAAG      UUC                U --UGAU      A U         G                ----GG   AAAAGAGAUGAUCGGU |
Stem-loop sequence | AUUAACAGCCAUAGUUUGCUGAUGGAGCAUCAUCAAGAUUCACAGAUCUAGCUGUGGUACUAUUAUAGUUGGCUAGUAGAGAAAACUUGGGAAUCUUGAUGAUGCUGCAUCGGCAAUCAAUGGCUUAGU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |