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BaseInfo

ncRNA ID	novel_vvi_miR342
Species	Vitis vinifera
Class	miRNA
Genome position	Chr5:19124429-19124497 [-]
Reference genome	12X
Source	SRR1528352;SRR1528361;SRR1528365;SRR1528376
Length	21
Mature sequence(if miRNA)	1 - AGCUGUACCCUCUCUCUUCCC - 21
Stem-loop(if miRNA)	--          A        AUA -       CC   GAAGAGAGAG GUACAGCU   C UUGCUCC  G   |||||||||| ||||||||   | |||||||  U   CUUCUCUCUC CAUGUCGA   G AACGAGG  A CC          C        -AG U       UA
Stem-loop sequence	GAAGAGAGAGAGUACAGCUAUACUUGCUCCCCGUAAUGGAGCAAUGGAAGCUGUACCCUCUCUCUUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA148067.1	ncRNA:21   CCCUUCUCUCUCCCAUGUCGA   1   |*|=||||||||||||||||* targets:592   GCGGAGAGAGAGGGUACAGCA   612 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_22551_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002271135.3	ncRNA:21   CCCUUCUCUCUCCCAUGUCGA   1   |*|=||||||||||||||||* targets:554   GCGGAGAGAGAGGGUACAGCA   574 Target Full Sequence	2.0	PREDICTED: Vitis vinifera putative gamma-glutamylcyclotransferase At3g02910 (LOC100266481), mRNA	NA	coding protein	psRNATarget
XM_002270459.3	ncRNA:21   CCCUUCUCUCUCCCAUGUCGA   1   |*|=||||||||||||||||* targets:439   GCGGAGAGAGAGGGUACAGCG   459 Target Full Sequence	2.0	PREDICTED: Vitis vinifera putative gamma-glutamylcyclotransferase At3g02910 (LOC100263029), mRNA	NA	coding protein	psRNATarget