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BaseInfo

ncRNA ID novel_vvi_miR338
Species Vitis vinifera
Class miRNA
Genome position Chr3:8454008-8454093 [+]
Reference genome 12X
Source SRR1528352;SRR1528353;SRR1528355;SRR1528361
Length 18
Mature sequence(if miRNA) 1 - UAGUUUUUUUGGUUGGCU - 18
Stem-loop(if miRNA) --    UU      UU    -U      UUG   UU      UUU
  UAGU  UUUUGG  GGCU  UCAGAG   UUA  UUCUAG   A
  ||||  ||||||  ||||  ||||||   |||  ||||||
  AUUA  GAGACC  UCGG  GGUUUU   GAU  GAGAUU   G
UU    UC      -U    UU      -UU   -U      UUC
Stem-loop sequence UAGUUUUUUUGGUUGGCUUUCAGAGUUGUUAUUUUCUAGUUUAGCUUUUAGAGUUAGUUUUUUGGUUGGCUUCCAGAGCUAUUAUU