ncRNA ID | novel_vvi_miR338 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr3:8454008-8454093 [+] |
Reference genome | 12X |
Source | SRR1528352;SRR1528353;SRR1528355;SRR1528361 |
Length | 18 |
Mature sequence(if miRNA) | 1 - UAGUUUUUUUGGUUGGCU - 18 |
Stem-loop(if miRNA) |
--    UU      UU    -U      UUG   UU      UUU   UAGU  UUUUGG  GGCU  UCAGAG   UUA  UUCUAG   A   ||||  ||||||  ||||  ||||||   |||  ||||||   AUUA  GAGACC  UCGG  GGUUUU   GAU  GAGAUU   G UU    UC      -U    UU      -UU   -U      UUC |
Stem-loop sequence | UAGUUUUUUUGGUUGGCUUUCAGAGUUGUUAUUUUCUAGUUUAGCUUUUAGAGUUAGUUUUUUGGUUGGCUUCCAGAGCUAUUAUU |