ncRNA ID | novel_vvi_miR336 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr3:7548965-7549052 [-] |
Reference genome | 12X |
Source | SRR1528352 |
Length | 23 |
Mature sequence(if miRNA) | 66 - AUCUUUUGUUCUAGGAAAUAUCU - 88 |
Stem-loop(if miRNA) |
--    U                C        U  AAAUAUCAU   AUCU UUGUUCUAGGAAAUAU UUCAUCAG UG         A   |||| |||||||||||||||| |||||||| ||   UAGA AACAAGGUCCUUUAUA AAGUAGUC AG         U UA    U                A        C  UACCUCUUA |
Stem-loop sequence | AUCUUUUGUUCUAGGAAAUAUCUUCAUCAGUUGAAAUAUCAUAUAUUCUCCAUGACCUGAUGAAAAUAUUUCCUGGAACAAUAGAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA169698.1 |
|
3.0 | TSA: Vitis vinifera Locus_3480_Transcript_2/4_Confidence_0.769.Vivi mRNA sequence | NA | coding protein | psRNATarget |