ncRNA ID | lus-miR172f |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AGAAUCUUGAUGAUGCUGCAU - NA |
Stem-loop(if miRNA) |
GC   -    G   U      GC UG               A  UGCAA  C       U   GUG AGUC UUG UUGCUG  G  GCAUCAUCAAGAUUC CA     AG UUCAUUU G   ||| |||| ||| ||||||  |  ||||||||||||||| ||     || |||||||   UAC UCAG AGC AACGGC  C  CGUAGUAGUUCUAAG GU     UC AGGUAAA A CA   A    G   U      UA GU               A  ---UG  -       G |
Stem-loop sequence | GCGUGAGUCGUUGUUUGCUGGCGUGGCAUCAUCAAGAUUCACAUGCAAAGCUUCAUUUUGAGAAAUGGACUGUUGAGAAUCUUGAUGAUGCUGCAUCGGCAAUCGAGGACUACAUAC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |