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BaseInfo

ncRNA ID lus-miR172f
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AGAAUCUUGAUGAUGCUGCAU - NA
Stem-loop(if miRNA) GC   -    G   U      GC UG               A  UGCAA  C       U
  GUG AGUC UUG UUGCUG  G  GCAUCAUCAAGAUUC CA     AG UUCAUUU G
  ||| |||| ||| ||||||  |  ||||||||||||||| ||     || |||||||
  UAC UCAG AGC AACGGC  C  CGUAGUAGUUCUAAG GU     UC AGGUAAA A
CA   A    G   U      UA GU               A  ---UG  -       G
Stem-loop sequence GCGUGAGUCGUUGUUUGCUGGCGUGGCAUCAUCAAGAUUCACAUGCAAAGCUUCAUUUUGAGAAAUGGACUGUUGAGAAUCUUGAUGAUGCUGCAUCGGCAAUCGAGGACUACAUAC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).