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BaseInfo

ncRNA ID	novel_vvi_miR334
Species	Vitis vinifera
Class	miRNA
Genome position	Chr2:3489134-3489184 [-]
Reference genome	12X
Source	SRR1528352;SRR1528353;SRR1528388;SRR1528417
Length	24
Mature sequence(if miRNA)	1 - ACCCAAGGUCGGACCAACUGAGCU - 24
Stem-loop(if miRNA)	--    AA     --    A     GA   CUCG  UUGGU  GACC UUGGG  A   ||||  |||||  |||| |||||  C   GAGU  AACCA  CUGG AACCC  A UC    -C     GG    -     AA
Stem-loop sequence	CUCGAAUUGGUGACCAUUGGGGAACAAACCCAAGGUCGGACCAACUGAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA160658.1	ncRNA:24   UCGAGUCAACCAGGCUGGAACCCA   1   |||||||||||||||=|||||||| targets:1103   AGCUCAGUUGGUCCGGCCUUGGGU   1126 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_6893_Transcript_4/10_Confidence_0.409.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA160657.1	ncRNA:24   UCGAGUCAACCAGGCUGGAACCCA   1   |||||||||||||||=|||||||| targets:1273   AGCUCAGUUGGUCCGGCCUUGGGU   1296 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_6893_Transcript_6/10_Confidence_0.500.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA166699.1	ncRNA:24   UCGAGUCAACCAGGCUGGAACCCA   1   ||||||||||||||||=||||||| targets:3114   AGCUCAGUUGGUCCGAUCUUGGGU   3137 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_2789_Transcript_3/8_Confidence_0.500.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA152851.1	ncRNA:24   UCGAGUCAACCAGGCUGGAACCCA   1   =|=||||||||||||=|||||||| targets:1994   GGUUCAGUUGGUCCGGCCUUGGGU   2017 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_2478_Transcript_4/11_Confidence_0.100.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010653303.2	ncRNA:24   UCGAGUCAACCAGGCUGGAACCCA   1   *||||||||||||||=|||||||* targets:4548   UGCUCAGUUGGUCCGGCCUUGGGC   4571 Target Full Sequence	2.5	PREDICTED: Vitis vinifera putative disease resistance RPP13-like protein 1 (LOC100265114), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_003632208.3	ncRNA:24   UCGAGUCAACCAGGCUGGAACCCA   1   *||||||||||||||=|||||||* targets:4571   UGCUCAGUUGGUCCGGCCUUGGGC   4594 Target Full Sequence	2.5	PREDICTED: Vitis vinifera putative disease resistance RPP13-like protein 1 (LOC100265114), transcript variant X1, mRNA	NA	coding protein	psRNATarget