ncRNA ID | novel_vvi_miR332 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr19:7113022-7113090 [+] |
Reference genome | 12X |
Source | SRR1528352;SRR1528358;SRR1528359;SRR1528364;SRR1528371;SRR1528373;SRR1528374;SRR1528375;SRR1528376;SRR1528377;SRR1528385;SRR1528387;SRR1528388;SRR1528391;SRR1528392;SRR1528393;SRR1528396;SRR1528397;SRR1528407;SRR1528408;SRR1528410;SRR1528412 |
Length | 24 |
Mature sequence(if miRNA) | 46 - UUCCAAAAGUAGGAAAAGUACUUG - 69 |
Stem-loop(if miRNA) |
--                   A    U     CA   AGUACUUUUCUUGCUUUUG AAGC AAAAU  A   ||||||||||||||||||| |||| |||||  U   UCAUGAAAAGGAUGAAAAC UUCG UUUUA  G GU                   C    U     AU |
Stem-loop sequence | AGUACUUUUCUUGCUUUUGAAAGCUAAAAUCAAUGUAAUUUUUGCUUCCAAAAGUAGGAAAAGUACUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA154789.1 |
|
0.0 | TSA: Vitis vinifera Locus_3033_Transcript_6/8_Confidence_0.571.Vivi mRNA sequence | NA | coding protein | psRNATarget |