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BaseInfo

ncRNA ID novel_vvi_miR332
Species Vitis vinifera
Class miRNA
Genome position Chr19:7113022-7113090 [+]
Reference genome 12X
Source SRR1528352;SRR1528358;SRR1528359;SRR1528364;SRR1528371;SRR1528373;SRR1528374;SRR1528375;SRR1528376;SRR1528377;SRR1528385;SRR1528387;SRR1528388;SRR1528391;SRR1528392;SRR1528393;SRR1528396;SRR1528397;SRR1528407;SRR1528408;SRR1528410;SRR1528412
Length 24
Mature sequence(if miRNA) 46 - UUCCAAAAGUAGGAAAAGUACUUG - 69
Stem-loop(if miRNA) --                   A    U     CA
  AGUACUUUUCUUGCUUUUG AAGC AAAAU  A
  ||||||||||||||||||| |||| |||||  U
  UCAUGAAAAGGAUGAAAAC UUCG UUUUA  G
GU                   C    U     AU
Stem-loop sequence AGUACUUUUCUUGCUUUUGAAAGCUAAAAUCAAUGUAAUUUUUGCUUCCAAAAGUAGGAAAAGUACUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA154789.1
ncRNA:24   GUUCAUGAAAAGGAUGAAAACCUU   1
  ||||||||||||||||||||||||
targets:2143   CAAGUACUUUUCCUACUUUUGGAA   2166

0.0 TSA: Vitis vinifera Locus_3033_Transcript_6/8_Confidence_0.571.Vivi mRNA sequence NA coding protein psRNATarget