ncRNA ID | lus-miR172e |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - GGAAUCUUGAUGAUGCUGCAG - NA |
Stem-loop(if miRNA) |
    UCACAACAAUAAC  C  C  C    UA   G                A   -    ACAAAGGC     UAAAAUAAAAGAGCUUAUCUUUAUAAGCU GGGU             AG CA UG UUGC  UUG AGCAUCAUCAAGAUUC CAA ACCC        AAAGU                             U ||||             || || || ||||  ||| |||||||||||||||| ||| ||||        ||||| UCCA             UC GU AC AACG  GAC UCGUAGUAGUUCUAAG GUU UGGG        CGGGU                             U     -------------  C  C  U    GC   G                G   A    ------GG     ACUUACUAAACCCGUUUUCACUUUUUUUU |
Stem-loop sequence | GGGUUCACAACAAUAACAGCCACUGCUUGCUAUUGGAGCAUCAUCAAGAUUCACAAACCCACAAAGGCAAAGUUAAAAUAAAAGAGCUUAUCUUUAUAAGCUUUUUUUUUUUCACUUUUGCCCAAAUCAUUCAUGGGCGGGGGUAUUGGGAAUCUUGAUGAUGCUGCAGCGGCAAUCACUGCCUACCU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |