ncRNA ID | novel_vvi_miR324 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:18867573-18867661 [+] |
Reference genome | 12X |
Source | SRR1528352;SRR1528364;SRR1528365;SRR1528370;SRR1528378;SRR1528379;SRR1528405;SRR1528407;SRR1528410 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGACACGAAGAAACGAAAGCC - 21 |
Stem-loop(if miRNA) |
--                     --   CAAU     C  AGAGA   CGACACGAAGAAACGAAAGCC  GGC    GCAGU CG     U   |||||||||||||||||||||  |||    ||||| ||     C   GCUGUGCUUCUUUGUUUUCGG  CUG    UGUCA GC     A UG                     GU   AGCU     A  GACAC |
Stem-loop sequence | CGACACGAAGAAACGAAAGCCGGCCAAUGCAGUCCGAGAGAUCACACAGCGAACUGUUCGAGUCUGGGCUUUUGUUUCUUCGUGUCGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA148542.1 |
|
1.0 | TSA: Vitis vinifera Locus_27955_Transcript_1/2_Confidence_0.750.Vivi mRNA sequence | NA | coding protein | psRNATarget |