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BaseInfo

ncRNA ID	novel_vvi_miR321
Species	Vitis vinifera
Class	miRNA
Genome position	Chr16:5436027-5436216 [-]
Reference genome	12X
Source	SRR1528352;SRR1528353;SRR1528356;SRR1528357;SRR1528360;SRR1528364;SRR1528367;SRR1528368;SRR1528369;SRR1528371;SRR1528372;SRR1528373;SRR1528376;SRR1528378;SRR1048206;SRR1528379;SRR1528380;SRR1528385;SRR1528386;SRR1528387;SRR1528388;SRR1528390;SRR1528391;SRR1528392;SRR1528394;SRR1528397;SRR1528405;SRR1528406;SRR1528407;SRR1528408;SRR1528410;SRR1528412;SRR890731
Length	24
Mature sequence(if miRNA)	167 - AAUAUUGUCUGCUUUAGGUCCACU - 190
Stem-loop(if miRNA)	--               A GU   C     C    AA U       AU    ----   --A    C   U    CAUC        UA    GA    A   AAUAUUGUCUGCUUU G  CCA UAGCC UCAC  C UUAAAAU  GUCU    ACA   AUAC AGA GAGU    CCUUAUAA  GUGU  AAGA A   ||||||||||||||| |  ||| ||||| ||||  | |||||||  ||||    |||   |||| ||| ||||    ||||||||  ||||  ||||   UUAUAACAGAUGAAA U  GGU AUCGG AGUG  G AAUUUUG  UAGA    UGU   UAUG UCU CUCA    GGAAUAUU  UACA  UUCU G AU               C UG   A     A    CG U       CG    UUGA   GCG    A   U    -ACA        --    -G    C
Stem-loop sequence	AAUAUUGUCUGCUUUAGGUCCACUAGCCCUCACAACUUUAAAAUAUGUCUACAAAUACCAGAUGAGUCAUCCCUUAUAAUAGUGUGAAAGAAAGCUCUUGACAUUUAUAAGGACAACUCUUCUAGUAUGCGUGUAGUUAGAUGCGUUUUAAUGGCGUGAAGGCUAAUGGGUUCAAAGUAGACAAUAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
FJ901270.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:304   AAUGCACCUGAAGCAGACAAAAUU   327 Target Full Sequence	2.5	Vitis vinifera calcineurin B-like protein 04 (CBL04) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001281064.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:304   AAUGCACCUGAAGCAGACAAAAUU   327 Target Full Sequence	2.5	Vitis vinifera calcineurin B-like protein 04 (CBL04), mRNA	NA	coding protein	psRNATarget
KT266265.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:413   AAUGCACCUGAAGCAGACAAAAUU   436 Target Full Sequence	2.5	Vitis vinifera cultivar Jingxiu calcineurin B-like protein 4 (CBL4) mRNA, complete cds	NA	coding protein	psRNATarget
XM_010664550.2	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:698   AAUGCACCUGAAGCAGACAAAAUU   721 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_019225811.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:718   AAUGCACCUGAAGCAGACAAAAUU   741 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_019225810.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:1187   AAUGCACCUGAAGCAGACAAAAUU   1210 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_010664548.2	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:1622   AAUGCACCUGAAGCAGACAAAAUU   1645 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_010664545.2	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:1770   AAUGCACCUGAAGCAGACAAAAUU   1793 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019225809.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:1838   AAUGCACCUGAAGCAGACAAAAUU   1861 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_010664546.2	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:1843   AAUGCACCUGAAGCAGACAAAAUU   1866 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019225808.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:2886   AAUGCACCUGAAGCAGACAAAAUU   2909 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019225807.1	ncRNA:24   UCACCUGGAUUUCGUCUGUUAUAA   1   |*||*||||=||||||||||*||| targets:2936   AAUGCACCUGAAGCAGACAAAAUU   2959 Target Full Sequence	2.5	PREDICTED: Vitis vinifera calcineurin B-like protein 04 (CBL04), transcript variant X1, mRNA	NA	coding protein	psRNATarget