ncRNA ID | lus-miR172d |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AGAAUCUUGAUGAUGCUGCAU - NA |
Stem-loop(if miRNA) |
---GCGA CG  -        U      GC UG               A AUGUAAAGCUAGUAGCUAAUACUAC        G  UG AGUCGUUG UUGCUG  G  GCAUCAUCAAGAUUC C                         C        |  || |||||||| ||||||  |  ||||||||||||||| |                         C        C  AC UCAGCAGC GACGGC  C  CGUAGUAGUUCUAAG G                         C UGAAAAG AU  G        U      UA GU               A UAGUCAGGUACAGGAUGAUGACCGG |
Stem-loop sequence | GCGAGCGUGAGUCGUUGUUUGCUGGCGUGGCAUCAUCAAGAUUCACAUGUAAAGCUAGUAGCUAAUACUACCCCGGCCAGUAGUAGGACAUGGACUGAUGAGAAUCUUGAUGAUGCUGCAUCGGCAGUCGACGACUGCAUACGAAAAGU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |