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BaseInfo

ncRNA ID lus-miR172d
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AGAAUCUUGAUGAUGCUGCAU - NA
Stem-loop(if miRNA) ---GCGA CG  -        U      GC UG               A AUGUAAAGCUAGUAGCUAAUACUAC
       G  UG AGUCGUUG UUGCUG  G  GCAUCAUCAAGAUUC C                         C
       |  || |||||||| ||||||  |  ||||||||||||||| |                         C
       C  AC UCAGCAGC GACGGC  C  CGUAGUAGUUCUAAG G                         C
UGAAAAG AU  G        U      UA GU               A UAGUCAGGUACAGGAUGAUGACCGG
Stem-loop sequence GCGAGCGUGAGUCGUUGUUUGCUGGCGUGGCAUCAUCAAGAUUCACAUGUAAAGCUAGUAGCUAAUACUACCCCGGCCAGUAGUAGGACAUGGACUGAUGAGAAUCUUGAUGAUGCUGCAUCGGCAGUCGACGACUGCAUACGAAAAGU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).