ncRNA ID | novel_vvi_miR314 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:10579552-10579687 [-] |
Reference genome | 12X |
Source | SRR1528352;SRR1528353;SRR1528354;SRR1528361 |
Length | 21 |
Mature sequence(if miRNA) | 116 - UAGUUUUUUUGGUUGGCUUCC - 136 |
Stem-loop(if miRNA) |
--       UUU   UG   UCC       UUAUU      UUU    --U      -U   --U      UG   UAGUUUU   GGU  GCU   AGAGCUG     UUCUAG   AGCU   UUAGAG  UAG   UUUUGG  U   |||||||   |||  |||   |||||||     ||||||   ||||   ||||||  |||   ||||||  G   GUCGAAA   UCG  UGA   UUUUGAU     GAGAUU   UCGA   GAUCUU  AUU   GAGACC  C UU       CCU   GU   UUU       ----U      --U    UUU      UU   GUU      UU |
Stem-loop sequence | UAGUUUUUUUGGUUGGCUUCCAGAGCUGUUAUUUUCUAGUUUAGCUUUUAGAGUUAGUUUUUGGUGUGCUUCCAGAGUUGUUAUUUUCUAGUUUAGCUUUUAGAGUUAGUUUUUUUAGUUGGCUUCCAAAGCUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA155981.1 |
|
2.5 | TSA: Vitis vinifera Locus_7577_Transcript_10/10_Confidence_0.289.Vivi mRNA sequence | NA | coding protein | psRNATarget |