ncRNA ID | novel_vvi_miR312 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:14277746-14277832 [-] |
Reference genome | 12X |
Source | SRR1528352;SRR1528359;SRR1528372;SRR1528397 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAACCUUGUAGAUGCGUUUUAAAG - 24 |
Stem-loop(if miRNA) |
--   U     -C     U   A     GA   AGUU    -    U   UUG GAUGU  CUACA AGG UAGGA  GAA    CCUA ACGU A   ||| |||||  ||||| ||| |||||  |||    |||| |||| U   AAU UUGCG  GAUGU UCC AUUCU  CUU    GGGU UGUA A GA   U     UA     -   A     -A   ----    A    U |
Stem-loop sequence | UUGUGAUGUCCUACAUAGGAUAGGAGAGAAAGUUCCUAACGUUAUAUAUGUAUGGGUUCAUCUUAACCUUGUAGAUGCGUUUUAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA142928.1 |
|
2.5 | TSA: Vitis vinifera Locus_12121_Transcript_6/10_Confidence_0.600.Vivi mRNA sequence | NA | coding protein | psRNATarget |