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BaseInfo

ncRNA ID novel_vvi_miR311
Species Vitis vinifera
Class miRNA
Genome position Chr14:19624200-19624283 [-]
Reference genome 12X
Source SRR1528352;SRR1528372;SRR1528376;SRR1528391
Length 21
Mature sequence(if miRNA) 64 - UUCUUAGAACCAAGGGCACCC - 84
Stem-loop(if miRNA) --        A    -   CA  C  A    G  -    ACUU
  UUCUUAGA CCAA GGG  CC UU AUAU UC CCUG    C
  |||||||| |||| |||  || || |||| || ||||    A
  AAGAGUUU GGUU CCC  GG AA UAUG AG GGAU    A
GU        -    A   AG  U  C    G  U    CCUU
Stem-loop sequence UUCUUAGAACCAAGGGCACCCUUAAUAUGUCCCUGACUUCAAUUCCUAGGUGAGGUAUCAAUGGGACCCAUUGGUUUGAGAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019216346.1
ncRNA:21   CCCACGGGAACCAAGAUUCUU   1
  ||||||=|||||||||||||*
targets:855   GGGUGCUCUUGGUUCUAAGAN   875

2.0 PREDICTED: Vitis vinifera uncharacterized mitochondrial protein AtMg00810-like (LOC109121619), mRNA NA coding protein psRNATarget