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BaseInfo

ncRNA ID novel_vvi_miR309
Species Vitis vinifera
Class miRNA
Genome position Chr14:22335463-22335585 [+]
Reference genome 12X
Source SRR1528352;SRR1528356;SRR1528364;SRR1528368;SRR1528369;SRR1528372;SRR1528374;SRR1528375;SRR1528377;SRR1528406;SRR1528407
Length 21
Mature sequence(if miRNA) 103 - UUGAUAUUAGCAGCUGAGAAC - 123
Stem-loop(if miRNA) --        A            G        AUU      C        GG  CAG  UAC
  UCUCAGCU CUAAUAUCAAGA AAUGAGAA   GAGAAC CAACUUUG  AU   CA   U
  |||||||| |||||||||||| ||||||||   |||||| ||||||||  ||   ||   U
  AGAGUCGA GAUUAUAGUUUU UUACUCUU   CUCUUG GUUGAAAC  UA   GU   A
CA        C            A        --G      A        GA  AAA  UCC
Stem-loop sequence UCUCAGCUACUAAUAUCAAGAGAAUGAGAAAUUGAGAACCCAACUUUGGGAUCAGCAUACUUACCUUGAAAAUAGCAAAGUUGAGUUCUCGUUCUCAUUAUUUUGAUAUUAGCAGCUGAGAAC