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BaseInfo

ncRNA ID lus-miR172c
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AGAAUCUUGAUGAUGCUGCAU - NA
Stem-loop(if miRNA)          --CG  A           U         A   ACUUAU  A     UC  -        AC
AGUCAAUAU    GC GAUGCGGCAUC UCAAGAUUC CAA      CC AGCCC  CC AUGACCGA  C
|||||||||    || ||||||||||| ||||||||| |||      || |||||  || ||||||||
UCGGUUAUA    CG CUACGUCGUAG AGUUCUAAG GUU      GG UUGGG  GG UGCUGGCU  G
         UAGA  G           U         A   -AUUUU  A     UU  C        AA
Stem-loop sequence AGUCAAUAUCGGCAGAUGCGGCAUCUUCAAGAUUCACAAACUUAUCCAAGCCCUCCCAUGACCGAACCGAAUCGGUCGUCGGUUGGGUUAGGUUUUAUUGAGAAUCUUGAUGAUGCUGCAUCGGCAGAUAUAUUGGCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).