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BaseInfo

ncRNA ID	novel_vvi_miR303
Species	Vitis vinifera
Class	miRNA
Genome position	Chr10:2296786-2296867 [+]
Reference genome	12X
Source	SRR1528351;SRR1528380;SRR1528381;SRR1528383
Length	24
Mature sequence(if miRNA)	1 - AGUUAGAGGAGAGUGGAUGUAGGC - 24
Stem-loop(if miRNA)	---AGU   A      U           ---     GCGCCGA       UAG GGAGAG GGAUGUAGGCA   GGGUU       A       ||| |||||| |||||||||||   |||||       AUC CUUCUC CUUACGUUUGU   CUCAA       C UUUCUC   C      U           GUU     AUAUCAC
Stem-loop sequence	AGUUAGAGGAGAGUGGAUGUAGGCAGGGUUGCGCCGAACCACUAUAAACUCUUGUGUUUGCAUUCUCUCUUCCCUACUCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA157323.1	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |||||||||||||||||||||=|| targets:43   GCCUACAUCCACUCUCCUCUAGCU   66 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019220650.1	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |==|-|||||*||||=|||||||| targets:107   GUUU-CAUCCUCUCUUCUCUAACU   129 Target Full Sequence	2.5	PREDICTED: Vitis vinifera glutathione S-transferase L3 (LOC100853342), transcript variant X3, mRNA	NA	coding protein	psRNATarget
FQ393186.1	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |==|-|||||*||||=|||||||| targets:44   GUUU-CAUCCUCUCUUCUCUAACU   66 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA2YE01	NA	coding protein	psRNATarget
FQ392544.1	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |==|-|||||*||||=|||||||| targets:103   GUUU-CAUCCUCUCUUCUCUAACU   125 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA5YD23	NA	coding protein	psRNATarget
XM_010652788.2	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |==|-|||||*||||=|||||||| targets:116   GUUU-CAUCCUCUCUUCUCUAACU   138 Target Full Sequence	2.5	PREDICTED: Vitis vinifera glutathione S-transferase L3 (LOC100853342), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_003632157.3	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |==|-|||||*||||=|||||||| targets:143   GUUU-CAUCCUCUCUUCUCUAACU   165 Target Full Sequence	2.5	PREDICTED: Vitis vinifera glutathione S-transferase L3 (LOC100853342), transcript variant X1, mRNA	NA	coding protein	psRNATarget
FQ393117.1	ncRNA:24   CGGAUGUAGGUGAGAGGAGAUUGA   1   |==|-|||||*||||=|||||||| targets:148   GUUU-CAUCCUCUCUUCUCUAACU   170 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA2YJ03	NA	coding protein	psRNATarget