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BaseInfo

ncRNA ID novel_vvi_miR302
Species Vitis vinifera
Class miRNA
Genome position Chr13:15093317-15093381 [+]
Reference genome 12X
Source SRR1528351;SRR1528357;SRR1528372;SRR1528387;SRR1528417
Length 24
Mature sequence(if miRNA) 1 - UGUGGCUAGCGUGGGCUUUGAACU - 24
Stem-loop(if miRNA) --U               U        AUAAA
   GUGGCUAGCGUGGGC UUGAACUA     A
   ||||||||||||||| ||||||||     A
   UACCGAUCGCACUCG AACUUGAU     A
CUU               U        AAAAA
Stem-loop sequence UGUGGCUAGCGUGGGCUUUGAACUAAUAAAAAAAAAAAUAGUUCAAUGCUCACGCUAGCCAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA139114.1
ncRNA:24   UCAAGUUUCGGGUGCGAUCGGUGU   1
  *|*|||||||*|||*|||||||||
targets:5311   CGGUCAAAGCACACUCUAGCCACA   5334

2.5 TSA: Vitis vinifera Locus_5042_Transcript_7/9_Confidence_0.394.Vivi mRNA sequence NA coding protein psRNATarget