ncRNA ID | novel_vvi_miR302 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:15093317-15093381 [+] |
Reference genome | 12X |
Source | SRR1528351;SRR1528357;SRR1528372;SRR1528387;SRR1528417 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUGGCUAGCGUGGGCUUUGAACU - 24 |
Stem-loop(if miRNA) |
--U               U        AUAAA    GUGGCUAGCGUGGGC UUGAACUA     A    ||||||||||||||| ||||||||     A    UACCGAUCGCACUCG AACUUGAU     A CUU               U        AAAAA |
Stem-loop sequence | UGUGGCUAGCGUGGGCUUUGAACUAAUAAAAAAAAAAAUAGUUCAAUGCUCACGCUAGCCAUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA139114.1 |
|
2.5 | TSA: Vitis vinifera Locus_5042_Transcript_7/9_Confidence_0.394.Vivi mRNA sequence | NA | coding protein | psRNATarget |