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BaseInfo

ncRNA ID novel_vvi_miR298
Species Vitis vinifera
Class miRNA
Genome position Chr1:16397154-16397366 [-]
Reference genome 12X
Source SRR1048204
Length 24
Mature sequence(if miRNA) 1 - CUAUUCAGCUAAAAAACAAACACC - 24
Stem-loop(if miRNA) --                       CU   UC           UU                     A  C     C  C                CUAAACUUAU   UAA
  UGUUUGUUUUUUGGCUGAAUAGA  AAG  AAAAUAUUUGG  UUUUCUAUUCAGCUGAAAGUA CU AUUGA AU AACCAAUAUAAUUAAA          UGA   C
  |||||||||||||||||||||||  |||  |||||||||||  ||||||||||||||||||||| || ||||| || ||||||||||||||||          |||
  ACAAACAAAAAAUCGACUUAUCU  UUC  UUUUAUAAACU  AAAAGAUAAGUUGAUUUUCAU GA UAACU UA UUGGUUGUAUUGAUUU          ACU   A
CC                       UU   GA           GU                     A  A     A  A                ---------C   UAA
Stem-loop sequence UGUUUGUUUUUUGGCUGAAUAGACUAAGUCAAAAUAUUUGGUUUUUUCUAUUCAGCUGAAAGUAACUCAUUGACAUCAACCAAUAUAAUUAAACUAAACUUAUUGAUAACAAAUUCACUUUAGUUAUGUUGGUUAAUAUCAAUAAGAUACUUUUAGUUGAAUAGAAAAUGUCAAAUAUUUUAGCUUUUUCUAUUCAGCUAAAAAACAAACACC