ncRNA ID | novel_vvi_miR298 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr1:16397154-16397366 [-] |
Reference genome | 12X |
Source | SRR1048204 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAUUCAGCUAAAAAACAAACACC - 24 |
Stem-loop(if miRNA) |
--                       CU   UC           UU                     A  C     C  C                CUAAACUUAU   UAA   UGUUUGUUUUUUGGCUGAAUAGA  AAG  AAAAUAUUUGG  UUUUCUAUUCAGCUGAAAGUA CU AUUGA AU AACCAAUAUAAUUAAA          UGA   C   |||||||||||||||||||||||  |||  |||||||||||  ||||||||||||||||||||| || ||||| || ||||||||||||||||          |||   ACAAACAAAAAAUCGACUUAUCU  UUC  UUUUAUAAACU  AAAAGAUAAGUUGAUUUUCAU GA UAACU UA UUGGUUGUAUUGAUUU          ACU   A CC                       UU   GA           GU                     A  A     A  A                ---------C   UAA |
Stem-loop sequence | UGUUUGUUUUUUGGCUGAAUAGACUAAGUCAAAAUAUUUGGUUUUUUCUAUUCAGCUGAAAGUAACUCAUUGACAUCAACCAAUAUAAUUAAACUAAACUUAUUGAUAACAAAUUCACUUUAGUUAUGUUGGUUAAUAUCAAUAAGAUACUUUUAGUUGAAUAGAAAAUGUCAAAUAUUUUAGCUUUUUCUAUUCAGCUAAAAAACAAACACC |