ncRNA ID | novel_vvi_miR296 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:16658114-16658192 [-] |
Reference genome | 12X |
Source | SRR1528351;SRR1528368;SRR1528373;SRR1528381;SRR1528382;SRR1528385;SRR1528405;SRR1528407;SRR1528417 |
Length | 24 |
Mature sequence(if miRNA) | 56 - GUUAGAGGAGAGUGGAUGUAGGUC - 79 |
Stem-loop(if miRNA) |
-GU   AG     U       --     GGUUGCAUCGAA    UAG  GAGAG GGAUGUA  GGUCG            C    |||  ||||| |||||||  |||||    AUC  UUCUC CUUACGU  AUGUU            C UUC   CU     U       UU     CUAAAAAUAUUA |
Stem-loop sequence | GUUAGAGGAGAGUGGAUGUAGGUCGGGUUGCAUCGAACCAUUAUAAAAAUCUUGUAUUUGCAUUCUCUCUUUCCUACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157323.1 |
|
1.5 | TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |