Search result

BaseInfo

ncRNA ID lus-miR172b
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AGAAUCUUGAUGAUGCUGCAU - NA
Stem-loop(if miRNA)       UGG    A                     ACAUGCAUUAUAUACA    A    AUUAAAUUAACUUUA
AGUCAU   UCGC GGUGCAGCAUUAUCAAGAUUC                UAGA UUAA               A
||||||   |||| |||||||||||||||||||||                |||| ||||
UCAGUA   GGCG CUACGUCGUAGUAGUUCUAAG                GUGA UGGU               A
      UAU    A                     ---------------A    -    AUCGUAUCAUCAUCC
Stem-loop sequence AGUCAUUGGUCGCAGGUGCAGCAUUAUCAAGAUUCACAUGCAUUAUAUACAUAGAAUUAAAUUAAAUUAACUUUAAACCUACUACUAUGCUAUGGUAGUGAGAAUCUUGAUGAUGCUGCAUCAGCGGUAUAUGACU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).