ncRNA ID | novel_vvi_miR282 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:21789991-21790174 [+] |
Reference genome | 12X |
Source | SRR1528351;SRR1528404 |
Length | 25 |
Mature sequence(if miRNA) | 160 - GAUAUAGGUGCGGUCUCGAAAAACU - 184 |
Stem-loop(if miRNA) |
---        GU                 AC   CU UC                      CGAGU                           U    UUUUUGGG  CGCACUUAUAUCGAUUG  CAU  U  UGUCAGUUUGAGUUUGAGUUUU     UGGGACCGCACCUAUAUCGAUCGGUUA C    ||||||||  |||||||||||||||||  |||  |  ||||||||||||||||||||||     |||||||||||||||||||||||||||    AAAAGCUC  GCGUGGAUAUAGCUAGU  GUA  A  AUAGUCAAACUCAAACUCAAAA     ACCCUGGCGUGGAUAUAGUUAGUCAGU U UCA        UG                 CA   AU GA                      -----                           A |
Stem-loop sequence | UUUUUGGGGUCGCACUUAUAUCGAUUGACCAUCUUUCUGUCAGUUUGAGUUUGAGUUUUCGAGUUGGGACCGCACCUAUAUCGAUCGGUUAUCUAUGACUGAUUGAUAUAGGUGCGGUCCCAAAAACUCAAACUCAAACUGAUAAGAUAAUGACUGAUCGAUAUAGGUGCGGUCUCGAAAAACU |