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BaseInfo

ncRNA ID novel_vvi_miR282
Species Vitis vinifera
Class miRNA
Genome position Chr4:21789991-21790174 [+]
Reference genome 12X
Source SRR1528351;SRR1528404
Length 25
Mature sequence(if miRNA) 160 - GAUAUAGGUGCGGUCUCGAAAAACU - 184
Stem-loop(if miRNA) ---        GU                 AC   CU UC                      CGAGU                           U
   UUUUUGGG  CGCACUUAUAUCGAUUG  CAU  U  UGUCAGUUUGAGUUUGAGUUUU     UGGGACCGCACCUAUAUCGAUCGGUUA C
   ||||||||  |||||||||||||||||  |||  |  ||||||||||||||||||||||     |||||||||||||||||||||||||||
   AAAAGCUC  GCGUGGAUAUAGCUAGU  GUA  A  AUAGUCAAACUCAAACUCAAAA     ACCCUGGCGUGGAUAUAGUUAGUCAGU U
UCA        UG                 CA   AU GA                      -----                           A
Stem-loop sequence UUUUUGGGGUCGCACUUAUAUCGAUUGACCAUCUUUCUGUCAGUUUGAGUUUGAGUUUUCGAGUUGGGACCGCACCUAUAUCGAUCGGUUAUCUAUGACUGAUUGAUAUAGGUGCGGUCCCAAAAACUCAAACUCAAACUGAUAAGAUAAUGACUGAUCGAUAUAGGUGCGGUCUCGAAAAACU