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BaseInfo

ncRNA ID	novel_vvi_miR280
Species	Vitis vinifera
Class	miRNA
Genome position	Chr1:6557822-6557893 [+]
Reference genome	12X
Source	SRR1528351;SRR1528357;SRR1528371;SRR1528380;SRR1528389;SRR1528411;SRR1528417;SRR1049295
Length	21
Mature sequence(if miRNA)	52 - CUGAAGUGUUUGGGGGAACUC - 72
Stem-loop(if miRNA)	--       UG         C      CCU  UC  G   GUUCCCU  AACACUUCA UGGGGA   UC  UA U   |||||||  ||||||||| ||||||   ||  ||   CAAGGGG  UUGUGAAGU AUCCUU   AG  AU U CU       GU         C      --C  UA  A
Stem-loop sequence	GUUCCCUUGAACACUUCACUGGGGACCUUCUCUAGUUAUAAUGACUUCCUACUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA152876.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:128   GAGCUCUCCCAAACACUUCAG   148 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_15568_Transcript_1/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010665998.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:157   GAGCUCUCCCAAACACUUCAG   177 Target Full Sequence	2.0	PREDICTED: Vitis vinifera low affinity sulfate transporter 3 (LOC100252269), mRNA	NA	coding protein	psRNATarget
KA152875.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:325   GAGCUCUCCCAAACACUUCAG   345 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_15568_Transcript_2/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654522.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   *|||||=|||||||||||||* targets:383   AAGUUCUCCCAAACACUUCAA   403 Target Full Sequence	2.0	PREDICTED: Vitis vinifera low affinity sulfate transporter 3 (LOC100257574), mRNA	NA	coding protein	psRNATarget