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BaseInfo

ncRNA ID novel_vvi_miR278
Species Vitis vinifera
Class miRNA
Genome position Chr19:22982640-22982719 [-]
Reference genome 12X
Source SRR1528351
Length 24
Mature sequence(if miRNA) 1 - UGGUGACUACGGCUUUGACUGUUU - 24
Stem-loop(if miRNA) --         A          A   C  A       CUU
  ACAGUCAAA CCGUAGUCAC AAC AC GUUUUAA   U
  ||||||||| |||||||||| ||| || |||||||
  UGUCAGUUU GGCAUCAGUG UUG UG CAAAAUU   A
UU         C          G   A  C       UGA
Stem-loop sequence ACAGUCAAAACCGUAGUCACAAACCACAGUUUUAACUUUAAGUUUAAAACCGUAGUUGGUGACUACGGCUUUGACUGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   UUUGUCAGUUUCGGCAUCAGUGGU   1
  ||||||||||||||*|||||||||
targets:33   AAACAGUCAAAGCCAUAGUCACCA   56

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget