ncRNA ID | novel_vvi_miR278 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr19:22982640-22982719 [-] |
Reference genome | 12X |
Source | SRR1528351 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGGUGACUACGGCUUUGACUGUUU - 24 |
Stem-loop(if miRNA) |
--         A          A   C  A       CUU   ACAGUCAAA CCGUAGUCAC AAC AC GUUUUAA   U   ||||||||| |||||||||| ||| || |||||||   UGUCAGUUU GGCAUCAGUG UUG UG CAAAAUU   A UU         C          G   A  C       UGA |
Stem-loop sequence | ACAGUCAAAACCGUAGUCACAAACCACAGUUUUAACUUUAAGUUUAAAACCGUAGUUGGUGACUACGGCUUUGACUGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |