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BaseInfo

ncRNA ID	novel_vvi_miR277
Species	Vitis vinifera
Class	miRNA
Genome position	Chr19:16862575-16862647 [+]
Reference genome	12X
Source	SRR1528351
Length	24
Mature sequence(if miRNA)	1 - AGAGGAGAGUGGAUGUAGGCUGGG - 24
Stem-loop(if miRNA)	--  A      U          ---U     GCGUCGA   AG GGAGAG GGAUGUAGGC    GGGUU       A   || |||||| ||||||||||    |||||   UC CUUCUC CUUACGUUUG    CUCAA       C CA  C      U          UGUU     AUAUUAC
Stem-loop sequence	AGAGGAGAGUGGAUGUAGGCUGGGUUGCGUCGAACCAUUAUAAACUCUUGUGUUUGCAUUCUCUCUUCCCUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA157323.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   |||=|||||||||||||||||||| targets:39   CCCGGCCUACAUCCACUCUCCUCU   62 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019223340.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1173   CCUA-CCUACAUCCACUCUCCUCA   1195 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_019223336.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1244   CCUA-CCUACAUCCACUCUCCUCA   1266 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_019223335.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1326   CCUA-CCUACAUCCACUCUCCUCA   1348 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_019223338.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1449   CCUA-CCUACAUCCACUCUCCUCA   1471 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_019223334.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1710   CCUA-CCUACAUCCACUCUCCUCA   1732 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019223339.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1713   CCUA-CCUACAUCCACUCUCCUCA   1735 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_019223332.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:1784   CCUA-CCUACAUCCACUCUCCUCA   1806 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019223342.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:2039   CCUA-CCUACAUCCACUCUCCUCA   2061 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X12, mRNA	NA	coding protein	psRNATarget
XM_019223337.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:2043   CCUA-CCUACAUCCACUCUCCUCA   2065 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_019223341.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:2099   CCUA-CCUACAUCCACUCUCCUCA   2121 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X11, mRNA	NA	coding protein	psRNATarget
XM_019223333.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:2232   CCUA-CCUACAUCCACUCUCCUCA   2254 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019223331.1	ncRNA:24   GGGUCGGAUGUAGGUGAGAGGAGA   1   ||=|-||||||||||||||||||* targets:2319   CCUA-CCUACAUCCACUCUCCUCA   2341 Target Full Sequence	1.0	PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100854551), transcript variant X1, mRNA	NA	coding protein	psRNATarget