ncRNA ID | novel_vvi_miR276 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr19:7877775-7877852 [+] |
Reference genome | 12X |
Source | SRR1528351;SRR1528363;SRR1528374;SRR1528380;SRR1528381;SRR1528383;SRR1528389;SRR1528391;SRR1528404;SRR1528408 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUAGAGGAGAGUGGAUGUAGGCC - 24 |
Stem-loop(if miRNA) |
-GU   A      U          - --     GCGUCGA    UAG GGAGAG GGAUGUAGGC C  GGGUU       A    ||| |||||| |||||||||| |  |||||    AUC CUUCUC CUUACGUUUG G  CUCAA       C CUC   C      U          A UU     AUAUCAC |
Stem-loop sequence | GUUAGAGGAGAGUGGAUGUAGGCCGGGUUGCGUCGAACCACUAUAAACUCUUGAGUUUGCAUUCUCUCUUCCCUACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157323.1 |
|
1.5 | TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |