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BaseInfo

ncRNA ID novel_vvi_miR276
Species Vitis vinifera
Class miRNA
Genome position Chr19:7877775-7877852 [+]
Reference genome 12X
Source SRR1528351;SRR1528363;SRR1528374;SRR1528380;SRR1528381;SRR1528383;SRR1528389;SRR1528391;SRR1528404;SRR1528408
Length 24
Mature sequence(if miRNA) 1 - GUUAGAGGAGAGUGGAUGUAGGCC - 24
Stem-loop(if miRNA) -GU   A      U          - --     GCGUCGA
   UAG GGAGAG GGAUGUAGGC C  GGGUU       A
   ||| |||||| |||||||||| |  |||||
   AUC CUUCUC CUUACGUUUG G  CUCAA       C
CUC   C      U          A UU     AUAUCAC
Stem-loop sequence GUUAGAGGAGAGUGGAUGUAGGCCGGGUUGCGUCGAACCACUAUAAACUCUUGAGUUUGCAUUCUCUCUUCCCUACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA157323.1
ncRNA:24   CCGGAUGUAGGUGAGAGGAGAUUG   1
  ||||||||||||||||||||||=|
targets:42   GGCCUACAUCCACUCUCCUCUAGC   65

1.5 TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget