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BaseInfo

ncRNA ID novel_vvi_miR272
Species Vitis vinifera
Class miRNA
Genome position Chr17:4008217-4008275 [-]
Reference genome 12X
Source SRR1528351
Length 24
Mature sequence(if miRNA) 1 - GUUCAUUUUAGCUAUGUUGGAUGA - 24
Stem-loop(if miRNA) --          A     C         U
  AUCCAACAUA UUAAA UGAACUUAU G
  |||||||||| ||||| ||||||||| A
  UAGGUUGUAU GAUUU ACUUGAAUA U
AG          C     U         A
Stem-loop sequence AUCCAACAUAAUUAAACUGAACUUAUUGAUAAUAAGUUCAUUUUAGCUAUGUUGGAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA161886.1
ncRNA:24   AGUAGGUUGUAUCGAUUUUACUUG   1
  |||||||||=||||||||||||||
targets:227   UCAUCCAACGUAGCUAAAAUGAAC   250

1.0 TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence NA coding protein psRNATarget